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emhR emhR emhB emhB emhA emhA citN citN emhC emhC PFL_1334 PFL_1334 fhuA fhuA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
emhRTranscriptional regulator EmhR; Identified by similarity to GB:AAQ92183.1; match to protein family HMM PF00440; match to protein family HMM PF08361. (210 aa)    
Predicted Functional Partners:
emhB
Efflux transporter, permease protein EmhB; Identified by similarity to GB:AAQ92181.1; match to protein family HMM PF00873; match to protein family HMM TIGR00915.
     
 0.682
emhA
Efflux transporter, membrane fusion protein subunit EmhA; Identified by similarity to GB:AAQ92180.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.551
citN
Citrate transporter; Identified by similarity to SP:P42308; match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM TIGR00784.
      
 0.531
emhC
Efflux transporter, outer membrane factor lipoprotein EmhC; Identified by similarity to GB:AAQ92182.1; match to protein family HMM PF02321; match to protein family HMM TIGR01845.
     
 0.509
PFL_1334
Integral membrane protein, DUF6 family; Identified by match to protein family HMM PF00892.
       0.501
fhuA
TonB-dependent outermembrane ferrichrome receptor FhuA; Transducer; identified by similarity to SP:P06971; match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783.
  
   
 0.403
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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